 Parent Directory
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ChangeLog
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1.17 |
14 months |
kichiki |
0.5-RELEASE
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KIrand.c
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1.3 |
4 months |
kichiki |
(KIrand_load_mt, KIrand_load_Gaussian): added.
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KIrand.h
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1.2 |
4 months |
kichiki |
(KIrand_load_mt, KIrand_load_Gaussian): added.
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Makefile.am
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1.30 |
2 months |
kichiki |
add bd-imp-fast.c.
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Makefile.in
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1.8 |
23 months |
kichiki |
revise stokes-nc-read.c
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XA-slip.c
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1.2 |
13 months |
kichiki |
update the code up to k=20 with split form of m2c.py.
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XA.c
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1.5 |
16 months |
kichiki |
update to the order of 148.
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XC-slip.c
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1.2 |
13 months |
kichiki |
update the code up to k=20 with split form of m2c.py.
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XC.c
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1.5 |
16 months |
kichiki |
update to the order of 187.
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XG-slip.c
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1.2 |
13 months |
kichiki |
update the code up to k=20 with split form of m2c.py.
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XG.c
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1.5 |
16 months |
kichiki |
update to the order of 147.
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XM-slip.c
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1.2 |
13 months |
kichiki |
update the code up to k=20 with split form of m2c.py.
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XM.c
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1.5 |
16 months |
kichiki |
update to the order of 149.
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XP.c
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1.2 |
18 months |
kichiki |
add some handling the orders beyond the implementation.
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XQ.c
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1.2 |
18 months |
kichiki |
add some handling the orders beyond the implementation.
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YA-slip.c
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1.2 |
13 months |
kichiki |
update the code up to k=20 with split form of m2c.py.
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YA.c
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1.5 |
16 months |
kichiki |
update to the order of 154.
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YB-slip.c
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1.2 |
13 months |
kichiki |
update the code up to k=20 with split form of m2c.py.
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YB.c
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1.5 |
16 months |
kichiki |
update to the order of 154.
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YC-slip.c
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1.2 |
13 months |
kichiki |
update the code up to k=20 with split form of m2c.py.
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YC.c
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1.5 |
16 months |
kichiki |
update to the order of 156.
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YG-slip.c
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1.2 |
13 months |
kichiki |
update the code up to k=20 with split form of m2c.py.
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YG.c
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1.5 |
16 months |
kichiki |
update to the order of 153.
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YH-slip.c
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1.2 |
13 months |
kichiki |
update the code up to k=20 with split form of m2c.py.
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YH.c
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1.5 |
16 months |
kichiki |
update to the order of 153.
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YM-slip.c
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1.2 |
13 months |
kichiki |
update the code up to k=20 with split form of m2c.py.
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YM.c
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1.5 |
16 months |
kichiki |
update to the order of 158.
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ZM-slip.c
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1.2 |
13 months |
kichiki |
update the code up to k=20 with split form of m2c.py.
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ZM.c
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1.5 |
16 months |
kichiki |
update to the order of 164.
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angles-guile.c
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1.6 |
3 months |
kichiki |
correct the strings for error message.
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angles-guile.h
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1.3 |
4 months |
kichiki |
(angles_guile_get): return NULL when '() is given.
-- the following is done on 2... |
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angles.c
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1.3 |
5 months |
kichiki |
(angles_scale_k): added.
(angles_add): add another parameter, scale.
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angles.h
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1.2 |
5 months |
kichiki |
(angles_scale_k): added.
(angles_add): add another parameter, scale.
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bd-imp-fast.c
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1.2 |
8 weeks |
kichiki |
(fastSI_evolve): change "flag_solver" by "solver" for struct BD_imp.
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bd-imp-fast.h
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1.1 |
2 months |
kichiki |
imported from working directory.
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bd-imp-nitsol.c
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1.2 |
4 months |
kichiki |
(BD_evolve_NITSOL_JGdP00, BD_evolve_NITSOL_imp_PC): removed.
use BD_evolve_JGdP0... |
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bd-imp-nitsol.h
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1.2 |
4 months |
kichiki |
(BD_evolve_NITSOL_JGdP00, BD_evolve_NITSOL_imp_PC): removed.
use BD_evolve_JGdP0... |
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bd-imp.c
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1.16 |
8 weeks |
kichiki |
(struct BD_imp): change "flag_solver" by "solver".
add comment for solver == 2 "... |
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bd-imp.h
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1.6 |
8 weeks |
kichiki |
(struct BD_imp): change "flag_solver" by "solver".
add comment for solver == 2 "... |
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bead-rod-guile.c
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1.3 |
8 weeks |
kichiki |
"nitsol" -> "NITSOL" for consistency in stokes3.scm, but "nitsol"
is still worki... |
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bead-rod-guile.h
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1.3 |
8 weeks |
kichiki |
"nitsol" -> "NITSOL" for consistency in stokes3.scm, but "nitsol"
is still worki... |
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bead-rod.c
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1.3 |
2 months |
kichiki |
-- the following is done on 2007-06-14 --
(struct BeadRod): add sys and dt for H... |
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bead-rod.h
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1.3 |
2 months |
kichiki |
-- the following is done on 2007-06-14 --
(struct BeadRod): add sys and dt for H... |
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bench.c
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1.4 |
2 years |
kichiki |
return the current time, not the difference.
the API holds.
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bench.h
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1.3 |
2 years |
kichiki |
return the current time, not the difference.
the API holds.
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bonds-groups.c
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1.1 |
2 months |
kichiki |
imported from working directory.
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bonds-groups.h
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1.1 |
2 months |
kichiki |
imported from working directory.
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bonds-guile.c
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1.13 |
2 months |
kichiki |
-- the following is done on 2007-07-18 --
update scheme example.
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bonds-guile.h
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1.11 |
2 months |
kichiki |
-- the following is done on 2007-07-18 --
update scheme example.
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bonds.c
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1.16 |
2 months |
kichiki |
-- the following is done on 2007-07-25 --
(BONDS_calc_force_spring_i): added (fr... |
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bonds.h
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1.12 |
2 months |
kichiki |
-- the following is done on 2007-07-25 --
(BONDS_calc_force_spring_i): added (fr... |
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brownian.c
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1.30 |
8 weeks |
kichiki |
(BD_ode_evolve): treat BD->scheme correctly, that is, invalid scheme
is detected... |
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brownian.h
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1.21 |
8 weeks |
kichiki |
(BD_ode_evolve): treat BD->scheme correctly, that is, invalid scheme
is detected... |
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chebyshev.c
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1.3 |
4 months |
kichiki |
add comment at include memory-check.h.
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chebyshev.h
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1.2 |
11 months |
kichiki |
(chebyshev_error_Rsqrt): added.
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coll.c
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1.5 |
5 months |
kichiki |
-- done on 2008-01-21 --
(collide_particles, collide_particles_2d):
take into ac... |
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coll.h
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1.3 |
17 months |
kichiki |
(collide_particles):
(collide_particles_2d):
bug fixed for handling velocities o... |
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confinement-guile.c
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1.2 |
3 months |
kichiki |
correct the strings for error message.
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confinement-guile.h
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1.1 |
4 months |
kichiki |
-- the following is done on 2007-05-14 --
added.
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confinement.c
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1.1 |
4 months |
kichiki |
-- the following is done on 2007-05-20 --
(struct confinement): remove X1 and X2... |
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confinement.h
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1.1 |
4 months |
kichiki |
-- the following is done on 2007-05-20 --
(struct confinement): remove X1 and X2... |
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dgeev_c.c
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1.2 |
10 months |
kichiki |
change the e-mail address.
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dgeev_c.h
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1.2 |
10 months |
kichiki |
change the e-mail address.
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dgemm_c.c
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1.2 |
12 months |
kichiki |
minor update.
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dgemm_c.h
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1.1 |
23 months |
kichiki |
import from stokes-src for plain BLAS environment.
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dgemv_c.c
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1.1 |
23 months |
kichiki |
import from stokes-src for plain BLAS environment.
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dgemv_c.h
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1.1 |
23 months |
kichiki |
import from stokes-src for plain BLAS environment.
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dgetri_c.c
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1.8 |
10 months |
kichiki |
-- the following is done on 2007-11-28 --
(lapack_solve_lin): added.
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dgetri_c.h
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1.4 |
10 months |
kichiki |
-- the following is done on 2007-11-28 --
(lapack_solve_lin): added.
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dnaupd_c.c
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1.2 |
12 months |
kichiki |
add CHECK_MALLOC for 'select'.
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dnaupd_c.h
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1.1 |
12 months |
kichiki |
imported from working directory.
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dpotrf_c.c
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1.4 |
11 months |
kichiki |
do not exit() at error but return info.
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dpotrf_c.h
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1.2 |
11 months |
kichiki |
(dpotrf_wrap): return info.
(dpotf2_wrap): return info.
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dsaupd_c.c
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1.2 |
12 months |
kichiki |
add CHECK_MALLOC for 'select'.
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dsaupd_c.h
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1.1 |
12 months |
kichiki |
imported from working directory.
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ev-LJ-guile.c
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1.2 |
3 months |
kichiki |
correct the comments.
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ev-LJ-guile.h
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1.2 |
3 months |
kichiki |
correct the comments.
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ev-LJ.c
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1.2 |
3 months |
kichiki |
-- the following is done far before --
(EV_LJ_fr): add info for the error messag... |
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ev-LJ.h
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1.1 |
4 months |
kichiki |
added.
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ev-dh-guile.c
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1.6 |
2 months |
kichiki |
-- the following is done on 2007-07-18 --
update scheme example.
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ev-dh-guile.h
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1.4 |
2 months |
kichiki |
-- the following is done on 2007-07-18 --
update scheme example.
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ev-dh.c
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1.4 |
4 months |
kichiki |
-- the following is done on 2007-05-22 --
(EV_DH_calc_force): skip for nu==0 par... |
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ev-dh.h
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1.3 |
4 months |
kichiki |
-- the following is done on 2007-05-22 --
(EV_DH_calc_force): skip for nu==0 par... |
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ewald-2.c
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1.1 |
7 years |
ichiki |
Initial revision
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ewald-2.h
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1.1.1.1 |
2 years |
ichiki |
initial import into CVS
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ewald-2f.c
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1.7 |
19 months |
kichiki |
(solve_res_2f): change the name from solve_res_ewald_2f().
(solve_mob_2f): chang... |
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ewald-2f.h
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1.4 |
19 months |
kichiki |
(solve_res_2f): change the name from solve_res_ewald_2f().
(solve_mob_2f): chang... |
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ewald-2ft.c
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1.6 |
19 months |
kichiki |
(solve_res_2ft): change the name from solve_res_ewald_2ft().
(solve_mob_2ft): ch... |
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ewald-2ft.h
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1.4 |
19 months |
kichiki |
(solve_res_2ft): change the name from solve_res_ewald_2ft().
(solve_mob_2ft): ch... |
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ewald-2fts.c
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1.7 |
19 months |
kichiki |
(solve_res_2fts): change the name from solve_res_ewald_2fts().
(solve_mob_2fts):... |
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ewald-2fts.h
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1.4 |
19 months |
kichiki |
(solve_res_2fts): change the name from solve_res_ewald_2fts().
(solve_mob_2fts):... |
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ewald-3f-matrix.c
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2.17 |
10 months |
kichiki |
-- the following is done on 2007-11-28 --
(solve_res_3f_matrix_0, solve_mob_lub_... |
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ewald-3f-matrix.h
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2.7 |
11 months |
kichiki |
(solve_res_3f_matrix_0, solve_res_lub_3f_matrix_0): added.
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ewald-3f.c
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4.16 |
10 months |
kichiki |
-- the following is done on 2007-11-24 --
(atimes_mob_lub_3f): make this routine... |
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ewald-3f.h
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4.8 |
10 months |
kichiki |
-- the following is done on 2007-11-24 --
(atimes_mob_lub_3f): make this routine... |
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ewald-3ft-matrix.c
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2.16 |
10 months |
kichiki |
-- the following is done on 2007-11-28 --
(solve_res_3ft_matrix_0, solve_mob_lub... |
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ewald-3ft-matrix.h
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2.7 |
11 months |
kichiki |
(solve_res_3ft_matrix_0, solve_res_lub_3ft_matrix_0): added.
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ewald-3ft.c
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4.16 |
10 months |
kichiki |
(solve_res_3ft): use solve_res_3ft_0 inside.
(solve_res_lub_3ft): use solve_res_... |
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ewald-3ft.h
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4.7 |
11 months |
kichiki |
stop setting the first guess by 0 everytime. (right now, solve_iter()
hold the l... |
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ewald-3fts-matrix.c
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2.18 |
9 months |
kichiki |
(solve_mob_3fts_matrix_0): added.
(solve_mob_3fts_matrix): use solve_mob_3fts_ma... |
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ewald-3fts-matrix.h
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2.9 |
9 months |
kichiki |
(solve_mob_3fts_matrix_0): added.
(solve_mob_3fts_matrix): use solve_mob_3fts_ma... |
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ewald-3fts.c
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5.18 |
9 months |
kichiki |
(solve_mix_lub_3fts_0): added.
(solve_mix_lub_3fts): use solve_mix_lub_3fts_0() ... |
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ewald-3fts.h
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5.10 |
9 months |
kichiki |
(solve_mix_lub_3fts_0): added.
(solve_mix_lub_3fts): use solve_mix_lub_3fts_0() ... |
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ewald.c
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1.11 |
9 months |
kichiki |
add the correction of the cell shift in reciprocal part, too.
-- the following i... |
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ewald.h
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1.7 |
14 months |
kichiki |
(scalars_mob_poly_scale_SD_): make the routine public.
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excluded-volume-guile.c
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1.6 |
2 months |
kichiki |
-- the following is done on 2007-07-18 --
update scheme example.
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excluded-volume-guile.h
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1.4 |
2 months |
kichiki |
-- the following is done on 2007-07-18 --
update scheme example.
|
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excluded-volume.c
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1.7 |
2 months |
kichiki |
correct the explanation for EV_init ().
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excluded-volume.h
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1.5 |
2 months |
kichiki |
correct the explanation for EV_init ().
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f.c
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2.13 |
2 months |
kichiki |
a minor style update.
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f.h
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2.8 |
10 months |
kichiki |
-- the following is done on 2007-11-18 --
(matrix_lub_f_2b, matrix_lub_f_2b_poly... |
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ft.c
|
2.14 |
17 months |
kichiki |
(calc_lub_ft_2b_poly, matrix_lub_ft_2b_poly):
correct the lubmin application.
us... |
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ft.h
|
2.9 |
17 months |
kichiki |
(calc_lub_ft_2b_poly, matrix_lub_ft_2b_poly): take particle indices
i1 and i2 in... |
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fts.c
|
2.16 |
17 months |
kichiki |
(calc_lub_fts_2b_poly, matrix_lub_fts_2b_poly):
correct the lubmin application.
... |
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fts.h
|
2.8 |
17 months |
kichiki |
(calc_lub_fts_2b_poly, matrix_lub_fts_2b_poly): take particle indices
i1 and i2 ... |
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libstokes.h
|
1.72 |
3 days |
kichiki |
-- the following is done on 2007-10-06 --
add KIrand_init() and KIrand_free() fr... |
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lub-matrix.c
|
1.17 |
2 months |
kichiki |
comment out ex_lub related stuff (until the new list_ex implemented).
|
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lub-matrix.h
|
1.4 |
17 months |
kichiki |
(make_matrix_lub_3f):
(make_matrix_lub_3ft):
(make_matrix_lub_3fts):
add polydis... |
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lub.c
|
5.15 |
2 months |
kichiki |
comment out ex_lub related stuff (until the new list_ex implemented).
|
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lub.h
|
5.5 |
10 months |
kichiki |
-- the following is done on 2007-11-18 --
(cond_lub, cond_lub_poly): make these ... |
|
matrix.c
|
1.11 |
10 months |
kichiki |
-- the following is done a while ago --
(dot_prod_matrix_): added.
|
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matrix.h
|
1.6 |
10 months |
kichiki |
-- the following is done a while ago --
(dot_prod_matrix_): added.
|
|
memory-check.h
|
1.1 |
18 months |
kichiki |
added.
|
|
minv-poly.c
|
1.4 |
17 months |
kichiki |
(scalars_lub_poly, scalars_lub_poly_full): take twobody_f *f12 (and
f21) in the ... |
|
minv-poly.h
|
1.5 |
13 months |
kichiki |
include twobody.h for struct twobody_f.
|
|
nitsol_c.c
|
1.4 |
2 months |
kichiki |
-- the following is done on 2007-06-26 --
(NITSOL_set_jacv): make sure for jacv ... |
|
nitsol_c.h
|
1.3 |
3 months |
kichiki |
-- the following is done on 2007-06-10 --
(NITSOL_set_norm_by_BLAS): added.
(NIT... |
|
noHI.c
|
1.2 |
5 months |
kichiki |
minor style change.
|
|
noHI.h
|
1.2 |
5 months |
kichiki |
minor style change.
|
|
non-ewald.c
|
1.8 |
11 months |
kichiki |
-- the following is done on 2007-11-05 --
(atimes_nonewald_3all, make_matrix_mob... |
|
non-ewald.h
|
1.4 |
18 months |
kichiki |
(scalars_nonewald_poly): change the results from the SD form
to the dimensional ... |
|
ode-quaternion.c
|
1.9 |
2 months |
kichiki |
update for new struct BONDS.
|
|
ode-quaternion.h
|
1.3 |
2 months |
kichiki |
update for new struct BONDS.
|
|
ode.c
|
1.14 |
2 months |
kichiki |
update for new struct BONDS.
|
|
ode.h
|
1.8 |
2 months |
kichiki |
update for new struct BONDS.
|
|
periodicity.c
|
1.3 |
9 months |
kichiki |
-- the following is done on 2007-12-19 --
(check_periodic, check_periodic_2d): a... |
|
periodicity.h
|
1.1 |
23 months |
kichiki |
import from stokes-src
|
|
stokes-guile.c
|
5.5 |
5 months |
kichiki |
-- the following is done on 2007-04-17 --
introduce GUILE16 for SCM_VECTORP and ... |
|
stokes-guile.h
|
5.3 |
10 months |
kichiki |
(guile_load): added.
|
|
stokes-nc-read.c
|
5.12 |
4 months |
kichiki |
(stokes_nc_get_rng): added.
(stokes_nc_open_): updated.
|
|
stokes-nc-read.h
|
5.6 |
4 months |
kichiki |
(stokes_nc_get_rng): added.
(stokes_nc_open_): updated.
|
|
stokes-nc.c
|
5.18 |
3 days |
kichiki |
-- the following is done on 2007-10-06 --
(stokes_nc_check_params): remove dupli... |
|
stokes-nc.h
|
5.15 |
3 days |
kichiki |
-- the following is done on 2007-10-06 --
(stokes_nc_check_params): remove dupli... |
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stokes.c
|
2.30 |
2 months |
kichiki |
(struct stokes): comment out ex_lub (until the new list_ex implemented).
(stokes... |
|
stokes.h
|
1.28 |
2 months |
kichiki |
(struct stokes): comment out ex_lub (until the new list_ex implemented).
(stokes... |
|
two-body-res.c
|
1.2 |
2 years |
ichiki |
add GPL notice.
|
|
two-body-res.h
|
1.2 |
2 years |
ichiki |
add GPL notice.
|
|
twobody-slip.c
|
1.2 |
13 months |
kichiki |
include f.h, ft.h, fts.h.
|
|
twobody-slip.h
|
1.1 |
13 months |
kichiki |
imported from working directory.
|
|
twobody.c
|
1.10 |
4 months |
kichiki |
(twobody_scale): correct the description.
|
|
twobody.h
|
1.9 |
4 months |
kichiki |
(twobody_scale): correct the description.
|
